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	<title>Comments on: Is mechanosynthesis feasible?  The debate moves up a gear.</title>
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	<description>Thoughts on the future of nanotechnology from Richard Jones</description>
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		<title>By: Chris Phoenix, CRN</title>
		<link>http://www.softmachines.org/wordpress/?p=50&#038;cpage=1#comment-1066</link>
		<dc:creator>Chris Phoenix, CRN</dc:creator>
		<pubDate>Tue, 15 Feb 2005 05:33:15 +0000</pubDate>
		<guid isPermaLink="false">/?p=50#comment-1066</guid>
		<description>A really good way to increase the range of products (e.g. reduce diffusion and spontaneous reconstruction) is to lower the temperature.

Also, you don&#039;t have to restrict yourself to adding atoms; there&#039;s nothing wrong with taking them off.  For example, you could passivate a surface, removing H atoms just where you want to deposit C, and then passivating what you just deposited and moving to the next site where you remove H, deposit C, hydrogenate...

But I don&#039;t think &quot;universal&quot; is important.  Certainly the word and the concept have not been a part of nanofactory proposals.  A nanofactory can be very flexible, even general-purpose, with just a few reactions and atom types.  You can do a lot without ever getting into atoms heavier than chlorine (except perhaps as catalysts for mechanosynthesis in a narrow set of special-purpose molecules).  Build a &quot;toolbox&quot; of nanoscale components, and simulate anything else.  The toolbox might not need much more than actuators, wires, digital logic, bearings, structures, mechanosynthetic tools, and maybe photon stuff.  

Chris</description>
		<content:encoded><![CDATA[<p>A really good way to increase the range of products (e.g. reduce diffusion and spontaneous reconstruction) is to lower the temperature.</p>
<p>Also, you don&#8217;t have to restrict yourself to adding atoms; there&#8217;s nothing wrong with taking them off.  For example, you could passivate a surface, removing H atoms just where you want to deposit C, and then passivating what you just deposited and moving to the next site where you remove H, deposit C, hydrogenate&#8230;</p>
<p>But I don&#8217;t think &#8220;universal&#8221; is important.  Certainly the word and the concept have not been a part of nanofactory proposals.  A nanofactory can be very flexible, even general-purpose, with just a few reactions and atom types.  You can do a lot without ever getting into atoms heavier than chlorine (except perhaps as catalysts for mechanosynthesis in a narrow set of special-purpose molecules).  Build a &#8220;toolbox&#8221; of nanoscale components, and simulate anything else.  The toolbox might not need much more than actuators, wires, digital logic, bearings, structures, mechanosynthetic tools, and maybe photon stuff.  </p>
<p>Chris</p>
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		<title>By: jim moore</title>
		<link>http://www.softmachines.org/wordpress/?p=50&#038;cpage=1#comment-1064</link>
		<dc:creator>jim moore</dc:creator>
		<pubDate>Tue, 15 Feb 2005 00:43:26 +0000</pubDate>
		<guid isPermaLink="false">/?p=50#comment-1064</guid>
		<description>I completely agree with Philip that  mechanosynthesis will not be able to make everything that can be made by more conventional types of chemical synthesis.  And I also think that the design of a fully programable nano-factory becomes more difficult with every additional mechanosynthesis tool that is needed.  The only way around this problem (that I see) is to make the molecule / nano-crystal by other methods then put it into a container that is compatible with the material inside and the diamond / graphite structure that you are building, then add the container to what you are making.   This still is not a Universal Assembler but it does expand the possibilities.</description>
		<content:encoded><![CDATA[<p>I completely agree with Philip that  mechanosynthesis will not be able to make everything that can be made by more conventional types of chemical synthesis.  And I also think that the design of a fully programable nano-factory becomes more difficult with every additional mechanosynthesis tool that is needed.  The only way around this problem (that I see) is to make the molecule / nano-crystal by other methods then put it into a container that is compatible with the material inside and the diamond / graphite structure that you are building, then add the container to what you are making.   This still is not a Universal Assembler but it does expand the possibilities.</p>
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		<title>By: Philip Moriarty</title>
		<link>http://www.softmachines.org/wordpress/?p=50&#038;cpage=1#comment-1062</link>
		<dc:creator>Philip Moriarty</dc:creator>
		<pubDate>Mon, 14 Feb 2005 23:32:56 +0000</pubDate>
		<guid isPermaLink="false">/?p=50#comment-1062</guid>
		<description>Chris,

First, I very much look forward to reading Drexler&#039;s most recent work when it&#039;s published. It&#039;ll be interesting to see whether the error rate (in the calculations) is significantly lower than that in Freitas et al.&#039;s work and, moreover, whether there is a useful strategy for &quot;porting&quot; the theoretical study to experiment.

I&#039;m not certain that I agree with you on the &quot;universal assemblers&quot; point. You seemingly argue that Drexler suggests that we&#039;d need a family of assemblers (one for each reaction). That&#039;s not at all how I interpret the section in &lt;i&gt; Engines of Creation &lt;/i&gt; which you cite. Drexler states that the assemblers &quot;will be able to use as &quot;tools&quot; almost any of the reactive molecules used by chemists - but they will wield them with the precision of programmed machines&quot;. This strongly suggests to me that an assembler will be able to pick up various tools to carry out different reactions. What you&#039;re suggesting is much closer to the &#039;molecular mill&#039; concept...

Nevertheless, even if a family of assemblers (one for each reaction) is to be used, the problem is that the parameter space is severely limited by the choice of material/ surface/ reactant. For example, high dangling bond densities are &#039;verboten&#039; (so we need to use passivated surfaces), high diffusion barriers are required (ruling out a number of metal surfaces), directional covalent bonds are required..etc..etc.. Leaving aside our discussion of diamondoid mechanosynthesis for a while, the idea that one can construct a family of assemblers with each assembler dedicated to a particular reaction **for practically every element in the periodic table** is deeply flawed.

Philip</description>
		<content:encoded><![CDATA[<p>Chris,</p>
<p>First, I very much look forward to reading Drexler&#8217;s most recent work when it&#8217;s published. It&#8217;ll be interesting to see whether the error rate (in the calculations) is significantly lower than that in Freitas et al.&#8217;s work and, moreover, whether there is a useful strategy for &#8220;porting&#8221; the theoretical study to experiment.</p>
<p>I&#8217;m not certain that I agree with you on the &#8220;universal assemblers&#8221; point. You seemingly argue that Drexler suggests that we&#8217;d need a family of assemblers (one for each reaction). That&#8217;s not at all how I interpret the section in <i> Engines of Creation </i> which you cite. Drexler states that the assemblers &#8220;will be able to use as &#8220;tools&#8221; almost any of the reactive molecules used by chemists &#8211; but they will wield them with the precision of programmed machines&#8221;. This strongly suggests to me that an assembler will be able to pick up various tools to carry out different reactions. What you&#8217;re suggesting is much closer to the &#8216;molecular mill&#8217; concept&#8230;</p>
<p>Nevertheless, even if a family of assemblers (one for each reaction) is to be used, the problem is that the parameter space is severely limited by the choice of material/ surface/ reactant. For example, high dangling bond densities are &#8216;verboten&#8217; (so we need to use passivated surfaces), high diffusion barriers are required (ruling out a number of metal surfaces), directional covalent bonds are required..etc..etc.. Leaving aside our discussion of diamondoid mechanosynthesis for a while, the idea that one can construct a family of assemblers with each assembler dedicated to a particular reaction **for practically every element in the periodic table** is deeply flawed.</p>
<p>Philip</p>
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		<title>By: Chris Phoenix, CRN</title>
		<link>http://www.softmachines.org/wordpress/?p=50&#038;cpage=1#comment-1059</link>
		<dc:creator>Chris Phoenix, CRN</dc:creator>
		<pubDate>Mon, 14 Feb 2005 17:58:57 +0000</pubDate>
		<guid isPermaLink="false">/?p=50#comment-1059</guid>
		<description>On error handling: I think all MM architectures assume that a molecular construction tool will be able to form several times its own mass of product before it either breaks or makes an uncorrected deposition error.  And implicitly assume that reliably correcting a correctable error should not take too much time.  I agree that Freitas&#039;s tool is not suitable for this.  But Drexler&#039;s may be.

Chris</description>
		<content:encoded><![CDATA[<p>On error handling: I think all MM architectures assume that a molecular construction tool will be able to form several times its own mass of product before it either breaks or makes an uncorrected deposition error.  And implicitly assume that reliably correcting a correctable error should not take too much time.  I agree that Freitas&#8217;s tool is not suitable for this.  But Drexler&#8217;s may be.</p>
<p>Chris</p>
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		<title>By: Chris Phoenix, CRN</title>
		<link>http://www.softmachines.org/wordpress/?p=50&#038;cpage=1#comment-1058</link>
		<dc:creator>Chris Phoenix, CRN</dc:creator>
		<pubDate>Mon, 14 Feb 2005 17:45:41 +0000</pubDate>
		<guid isPermaLink="false">/?p=50#comment-1058</guid>
		<description>On &quot;universal assemblers&quot;: The relevant &lt;a href=&quot;http://foresight.org/EOC/EOC_Chapter_1.html#section06of10&quot;&gt;section of EoC&lt;/a&gt; does not suggest that a single machine will be able to do almost any reaction.  It suggests that for almost any reaction, it will be possible to develop a machine that can do it.  The text of the section simply does not invoke the idea of a single &quot;universal&quot; assembler machine.  That idea grew up afterward.

On material systems and reactions: Drexler has done some very interesting work over the last few months, that will be published over the next few months.  Basically, he&#039;s found a tool that does not leave dangling bonds on the tool when the deposited moiety is removed.  Thus the transfer is far more energetically favorable than the Freitas/Merkle tool, and the dimer will reliably leave the tool when given a chance to move to diamond, graphite, or buckytube.  

Chris</description>
		<content:encoded><![CDATA[<p>On &#8220;universal assemblers&#8221;: The relevant <a href="http://foresight.org/EOC/EOC_Chapter_1.html#section06of10">section of EoC</a> does not suggest that a single machine will be able to do almost any reaction.  It suggests that for almost any reaction, it will be possible to develop a machine that can do it.  The text of the section simply does not invoke the idea of a single &#8220;universal&#8221; assembler machine.  That idea grew up afterward.</p>
<p>On material systems and reactions: Drexler has done some very interesting work over the last few months, that will be published over the next few months.  Basically, he&#8217;s found a tool that does not leave dangling bonds on the tool when the deposited moiety is removed.  Thus the transfer is far more energetically favorable than the Freitas/Merkle tool, and the dimer will reliably leave the tool when given a chance to move to diamond, graphite, or buckytube.  </p>
<p>Chris</p>
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		<title>By: John B</title>
		<link>http://www.softmachines.org/wordpress/?p=50&#038;cpage=1#comment-1016</link>
		<dc:creator>John B</dc:creator>
		<pubDate>Thu, 10 Feb 2005 18:28:34 +0000</pubDate>
		<guid isPermaLink="false">/?p=50#comment-1016</guid>
		<description>Erin - 

A point. However, diamond (and potentially other carbon materials - graphenes, buckytube, buckyball) does not do everything that you&#039;d want objects to do. For instance, diamond is slightly unstable in &#039;normal&#039; PVT conditions,  buckytubes are vulnerable to atomic oxygen degredation, etc. 

While diamondoid mechanochemistry, if it comes to be, would be wonderful in many ways, it won&#039;t solve the &#039;universal assembler&#039; problem. That is, there&#039;ll still be lots of problems that need solutions using non-carbon materials. 

However, it *may* be possible to use a carbon nanoassembler to make the tools to make the tools to do the job you want. IE - use diamondoid reaction vessels to handle chemical synthesis of other elements to make &#039;food&#039; or other materials that aren&#039;t just carbon. This is a non-trivial R&amp;D project, however, on top of the already non-trivial R&amp;D needed to get diamondoid mechanochemistry - or any other nanofactory/molecular mill capability - off the ground.

-John</description>
		<content:encoded><![CDATA[<p>Erin &#8211; </p>
<p>A point. However, diamond (and potentially other carbon materials &#8211; graphenes, buckytube, buckyball) does not do everything that you&#8217;d want objects to do. For instance, diamond is slightly unstable in &#8216;normal&#8217; PVT conditions,  buckytubes are vulnerable to atomic oxygen degredation, etc. </p>
<p>While diamondoid mechanochemistry, if it comes to be, would be wonderful in many ways, it won&#8217;t solve the &#8216;universal assembler&#8217; problem. That is, there&#8217;ll still be lots of problems that need solutions using non-carbon materials. </p>
<p>However, it *may* be possible to use a carbon nanoassembler to make the tools to make the tools to do the job you want. IE &#8211; use diamondoid reaction vessels to handle chemical synthesis of other elements to make &#8216;food&#8217; or other materials that aren&#8217;t just carbon. This is a non-trivial R&#038;D project, however, on top of the already non-trivial R&#038;D needed to get diamondoid mechanochemistry &#8211; or any other nanofactory/molecular mill capability &#8211; off the ground.</p>
<p>-John</p>
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		<title>By: Erin</title>
		<link>http://www.softmachines.org/wordpress/?p=50&#038;cpage=1#comment-1013</link>
		<dc:creator>Erin</dc:creator>
		<pubDate>Thu, 10 Feb 2005 04:39:30 +0000</pubDate>
		<guid isPermaLink="false">/?p=50#comment-1013</guid>
		<description>I think something important should be pointed out here: When it comes to solid three dimensional consumer good items,  from paper to swords, from chairs and cars, to clothing and houses, all we really need is a basic set of diamondoid mechanosynthesis systems, and then, using SURFACE CONTROL techniques, such as active color plates, or hinges and such in the right places, we can make almost any   shape or texture, using diamond as the basic modular component. You can make &quot;Diamondoid Wood&quot; by giving the surface the right texture and color etc, and you can give it any color or pattern of colors on its surface. You do not *NEED* to be able to synthesize every actual molecule such as wood and cellulose and the rest.</description>
		<content:encoded><![CDATA[<p>I think something important should be pointed out here: When it comes to solid three dimensional consumer good items,  from paper to swords, from chairs and cars, to clothing and houses, all we really need is a basic set of diamondoid mechanosynthesis systems, and then, using SURFACE CONTROL techniques, such as active color plates, or hinges and such in the right places, we can make almost any   shape or texture, using diamond as the basic modular component. You can make &#8220;Diamondoid Wood&#8221; by giving the surface the right texture and color etc, and you can give it any color or pattern of colors on its surface. You do not *NEED* to be able to synthesize every actual molecule such as wood and cellulose and the rest.</p>
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		<title>By: John B</title>
		<link>http://www.softmachines.org/wordpress/?p=50&#038;cpage=1#comment-688</link>
		<dc:creator>John B</dc:creator>
		<pubDate>Wed, 12 Jan 2005 15:47:52 +0000</pubDate>
		<guid isPermaLink="false">/?p=50#comment-688</guid>
		<description>Fair enough, Dr Moriarty. Look forward to reading the material!

-John</description>
		<content:encoded><![CDATA[<p>Fair enough, Dr Moriarty. Look forward to reading the material!</p>
<p>-John</p>
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		<title>By: Philip Moriarty</title>
		<link>http://www.softmachines.org/wordpress/?p=50&#038;cpage=1#comment-681</link>
		<dc:creator>Philip Moriarty</dc:creator>
		<pubDate>Tue, 11 Jan 2005 21:00:38 +0000</pubDate>
		<guid isPermaLink="false">/?p=50#comment-681</guid>
		<description>Hi John,

Chris Phoenix and I have covered very many issues related to your post in our recent debate. This will be published in its entirety on &quot;Soft Machines&quot; in the near future. I&#039;d very much like to hear your comments on the debate and if your questions haven;t been addressed by the material in the debate, I&#039;d be more than happy to go into more detail.

Best wishes,

Philip</description>
		<content:encoded><![CDATA[<p>Hi John,</p>
<p>Chris Phoenix and I have covered very many issues related to your post in our recent debate. This will be published in its entirety on &#8220;Soft Machines&#8221; in the near future. I&#8217;d very much like to hear your comments on the debate and if your questions haven;t been addressed by the material in the debate, I&#8217;d be more than happy to go into more detail.</p>
<p>Best wishes,</p>
<p>Philip</p>
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		<title>By: John B</title>
		<link>http://www.softmachines.org/wordpress/?p=50&#038;cpage=1#comment-671</link>
		<dc:creator>John B</dc:creator>
		<pubDate>Mon, 10 Jan 2005 18:15:59 +0000</pubDate>
		<guid isPermaLink="false">/?p=50#comment-671</guid>
		<description>Folks - thanks for the wonderful brain chow, first off. 

Second off - Dr Moriarty - Your arguements above seem to indicate that you&#039;re targetting the concept of &#039;general&#039; or &#039;universal&#039; assemblers as being beyond reasonable, and make some very good arguements along those lines. However, does this doom mechanosynthetic nanotech, in your opinion?

Would it be &#039;enough&#039; to be able to create carbon-carbon bonds in 3D, creating fullerines, diamondoid, and/or graphite type products? Would this or would this not be a reasonable initial goal, gaining a large amount of nanotechnological wet-dream capability in this way for a relatively minute number of chemical interactions that would need to be supported?

If this is &#039;good enough&#039;, what is your position on Merkle&#039;s paper on mechanochemistry or &#039;hydrocarbon metabolism&#039; (at www.zyvex.com/nanotech/hydroCarbonMetabolism.html)? (My apologies if I&#039;ve missed reference(s) to your position previously, but I&#039;ve not run across them in the reading I&#039;ve done...)

Sincerely,
John B</description>
		<content:encoded><![CDATA[<p>Folks &#8211; thanks for the wonderful brain chow, first off. </p>
<p>Second off &#8211; Dr Moriarty &#8211; Your arguements above seem to indicate that you&#8217;re targetting the concept of &#8216;general&#8217; or &#8216;universal&#8217; assemblers as being beyond reasonable, and make some very good arguements along those lines. However, does this doom mechanosynthetic nanotech, in your opinion?</p>
<p>Would it be &#8216;enough&#8217; to be able to create carbon-carbon bonds in 3D, creating fullerines, diamondoid, and/or graphite type products? Would this or would this not be a reasonable initial goal, gaining a large amount of nanotechnological wet-dream capability in this way for a relatively minute number of chemical interactions that would need to be supported?</p>
<p>If this is &#8216;good enough&#8217;, what is your position on Merkle&#8217;s paper on mechanochemistry or &#8216;hydrocarbon metabolism&#8217; (at <a href="http://www.zyvex.com/nanotech/hydroCarbonMetabolism.html" rel="nofollow">http://www.zyvex.com/nanotech/hydroCarbonMetabolism.html</a>)? (My apologies if I&#8217;ve missed reference(s) to your position previously, but I&#8217;ve not run across them in the reading I&#8217;ve done&#8230;)</p>
<p>Sincerely,<br />
John B</p>
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